Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 AC009486.1-201ENST00000569860 813 ntBASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 AC005252.2-201ENST00000624630 1141 ntBASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRGV1A0A0A0MS02 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AGER-206ENST00000375070 1463 ntTSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 MGST3-203ENST00000367885 680 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 APOA1-205ENST00000375329 927 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AP006294.1-201ENST00000415407 339 ntBASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 TP53TG3HP-202ENST00000569755 579 ntBASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 COX11-202ENST00000571584 1108 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 KSR1-207ENST00000578981 748 ntTSL 4 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AC027307.3-201ENST00000594262 1100 ntBASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AC023908.3-201ENST00000564211 3047 ntBASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRGV1A0A0A0MS02 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms