Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 ACKR1-201ENST00000368121 1240 ntBASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 TPT1P11-201ENST00000458482 498 ntBASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 AC022447.6-201ENST00000515522 438 ntBASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 AP001063.1-201ENST00000568332 529 ntBASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 AC004466.1-201ENST00000599515 1080 ntBASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF11Q9Y3C5 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 ACTBP8-201ENST00000403258 1108 ntBASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 PIN1P1-201ENST00000412108 996 ntBASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 AC093433.1-201ENST00000458048 571 ntBASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 AC190387.1-201ENST00000551683 408 ntBASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 MIR4745-201ENST00000577608 62 ntBASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 SALL4P5-201ENST00000419001 1760 ntBASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF11Q9Y3C5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF11Q9Y3C5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms