Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 TREML5P-201ENST00000421694 576 ntBASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 MEIS3P1-201ENST00000495167 958 ntBASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 MIR193BHG-211ENST00000641433 5365 ntBASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 AC015802.1-201ENST00000588104 1449 ntBASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 AL139385.1-201ENST00000611744 3272 ntBASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 LILRP1-201ENST00000444199 1370 ntBASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGB4Q9UN71 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 MIR943-201ENST00000401286 94 ntBASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 AC114501.2-201ENST00000439631 535 ntBASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 AC092337.1-201ENST00000568699 1129 ntBASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 AL844908.2-201ENST00000609461 460 ntBASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB4Q9UN71 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDHGB4Q9UN71 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms