Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 SERBP1P5-201ENST00000510079 1181 ntBASIC13.17□□□□□ -0.3
DUX4Q9UBX2 SDHAP3-202ENST00000515467 728 ntBASIC13.17□□□□□ -0.3
DUX4Q9UBX2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 AC074044.1-201ENST00000609673 707 ntBASIC13.17□□□□□ -0.3
DUX4Q9UBX2 AJ011932.1-201ENST00000621707 465 ntBASIC13.17□□□□□ -0.3
DUX4Q9UBX2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.17□□□□□ -0.3
DUX4Q9UBX2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 AC027612.1-201ENST00000445234 2395 ntBASIC13.17□□□□□ -0.3
DUX4Q9UBX2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 AC027601.5-201ENST00000624065 2482 ntBASIC13.17□□□□□ -0.3
DUX4Q9UBX2 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DUX4Q9UBX2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 AC105250.1-201ENST00000509378 2057 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 AL928921.2-201ENST00000641325 2442 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 AC236430.1-201ENST00000402231 743 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 AC114501.2-201ENST00000439631 535 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 GNAQP1-201ENST00000444815 1067 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 TSPY16P-201ENST00000449843 468 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 ZNF890P-202ENST00000530367 1156 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.16□□□□□ -0.3
DUX4Q9UBX2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
DUX4Q9UBX2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms