Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 KRT8P13-201ENST00000463294 1010 ntBASIC14.15□□□□□ -0.14
CCDC88CQ9P219 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 AC091804.1-201ENST00000486888 567 ntBASIC14.15□□□□□ -0.14
CCDC88CQ9P219 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 AL022328.3-201ENST00000607943 679 ntBASIC14.15□□□□□ -0.14
CCDC88CQ9P219 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CCDC88CQ9P219 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
CCDC88CQ9P219 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 FTLP10-202ENST00000505798 471 ntBASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AC138466.3-201ENST00000619983 221 ntBASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AL008718.2-201ENST00000609206 1313 ntBASIC14.14□□□□□ -0.15
CCDC88CQ9P219 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 RNA5SP486-201ENST00000515961 83 ntBASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 NDUFV2P1-201ENST00000596415 907 ntBASIC14.14□□□□□ -0.15
CCDC88CQ9P219 AL603764.1-201ENST00000636452 321 ntBASIC14.14□□□□□ -0.15
CCDC88CQ9P219 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCDC88CQ9P219 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 KRT8P4-201ENST00000509735 1454 ntBASIC14.13□□□□□ -0.15
CCDC88CQ9P219 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC88CQ9P219 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms