Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MKS1Q9NXB0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MKS1Q9NXB0 AC064801.2-201ENST00000625052 1303 ntBASIC14.63□□□□□ -0.07
MKS1Q9NXB0 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MKS1Q9NXB0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MKS1Q9NXB0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MKS1Q9NXB0 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MKS1Q9NXB0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
MKS1Q9NXB0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 AC097376.2-205ENST00000610159 5334 ntBASIC14.62□□□□□ -0.07
MKS1Q9NXB0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 AC099521.3-201ENST00000624251 2938 ntBASIC14.62□□□□□ -0.07
MKS1Q9NXB0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 AC022144.1-201ENST00000602255 1580 ntBASIC14.62□□□□□ -0.07
MKS1Q9NXB0 AC099568.2-201ENST00000609194 695 ntBASIC14.62□□□□□ -0.07
MKS1Q9NXB0 AP005019.2-201ENST00000615104 511 ntBASIC14.62□□□□□ -0.07
MKS1Q9NXB0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MKS1Q9NXB0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 LRRC59-203ENST00000576448 1531 ntBASIC14.61□□□□□ -0.07
MKS1Q9NXB0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 FAM86GP-201ENST00000448322 971 ntBASIC14.61□□□□□ -0.07
MKS1Q9NXB0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 AC004890.2-204ENST00000481968 304 ntBASIC14.61□□□□□ -0.07
MKS1Q9NXB0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MKS1Q9NXB0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms