Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 COX11-210ENST00000639671 696 ntBASIC12.73□□□□□ -0.37
GCM1Q9NP62 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.73□□□□□ -0.37
GCM1Q9NP62 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GCM1Q9NP62 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 CLUHP2-201ENST00000426660 1303 ntBASIC12.72□□□□□ -0.37
GCM1Q9NP62 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCM1Q9NP62 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.72□□□□□ -0.37
GCM1Q9NP62 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms