Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 AC092135.3-201ENST00000624151 1846 ntBASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 AC017083.2-201ENST00000608069 979 ntBASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 AL033527.5-201ENST00000641382 801 ntBASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 AC010327.5-201ENST00000586923 3061 ntBASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 AL136172.1-201ENST00000598590 1394 ntBASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 AC097376.2-205ENST00000610159 5334 ntBASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF3BQ9BZI7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 RN7SKP230-201ENST00000365642 335 ntBASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 U91328.1-201ENST00000437528 223 ntBASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 KRT18P25-201ENST00000508931 1278 ntBASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 AC084346.2-201ENST00000607097 949 ntBASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 AL603764.1-201ENST00000636452 321 ntBASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF3BQ9BZI7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 AL606495.2-201ENST00000605867 535 ntBASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 AC011840.2-201ENST00000563063 1520 ntBASIC17.71■□□□□ 0.43
UPF3BQ9BZI7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms