Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AC092384.3-202ENST00000564646 2873 ntBASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AL929302.1-201ENST00000426556 871 ntBASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AC078875.1-201ENST00000431907 724 ntBASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 RN7SL718P-201ENST00000581254 303 ntBASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AC097359.3-201ENST00000603982 1210 ntBASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 MIR6893-201ENST00000613458 69 ntBASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 AC138466.3-201ENST00000619983 221 ntBASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNTNAP3Q9BZ76 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 MTHFR-217ENST00000641820 1569 ntBASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 LINC01815-202ENST00000641468 1409 ntBASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 MAGEA7P-201ENST00000436482 942 ntBASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 FTH1P22-201ENST00000456305 520 ntBASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.1□□□□□ -0.15
CNTNAP3Q9BZ76 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms