Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 AC098850.1-201ENST00000419919 790 ntBASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 AC007969.1-201ENST00000433675 447 ntBASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C1orf54Q8WWF1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 LRRC59-203ENST00000576448 1531 ntBASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 AC055876.2-201ENST00000531834 546 ntBASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 AC020910.6-201ENST00000623084 1459 ntBASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.44■□□□□ 0.06
C1orf54Q8WWF1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms