Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 KRT18P46-201ENST00000435568 1279 ntBASIC17.62■□□□□ 0.41
SNED1Q8TER0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 RN7SL494P-201ENST00000461517 304 ntBASIC17.62■□□□□ 0.41
SNED1Q8TER0 RN7SL23P-201ENST00000484055 275 ntBASIC17.62■□□□□ 0.41
SNED1Q8TER0 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 AC226150.1-201ENST00000544259 466 ntBASIC17.62■□□□□ 0.41
SNED1Q8TER0 AC027139.1-201ENST00000565286 951 ntBASIC17.62■□□□□ 0.41
SNED1Q8TER0 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.62■□□□□ 0.41
SNED1Q8TER0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNED1Q8TER0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 AC021305.1-201ENST00000520656 1514 ntBASIC17.61■□□□□ 0.41
SNED1Q8TER0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 GNG10P1-201ENST00000452289 199 ntBASIC17.61■□□□□ 0.41
SNED1Q8TER0 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SNED1Q8TER0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNED1Q8TER0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 AC067931.2-201ENST00000623655 2003 ntBASIC17.6■□□□□ 0.41
SNED1Q8TER0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.6■□□□□ 0.41
SNED1Q8TER0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNED1Q8TER0 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms