Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 AC232323.1-201ENST00000540724 2099 ntBASIC9.95□□□□□ -0.82
SCXQ7RTU7 REXO1L5P-201ENST00000622260 2098 ntBASIC9.95□□□□□ -0.82
SCXQ7RTU7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
SCXQ7RTU7 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SCXQ7RTU7 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 PDIA3P1-201ENST00000471856 1510 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 ANKRD19P-201ENST00000338192 862 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 ACTG1P3-201ENST00000431775 1114 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 CTBP2P5-201ENST00000454986 1264 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 KRT18P43-201ENST00000469825 1281 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 AC068587.3-201ENST00000526613 355 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 ENPP7P5-201ENST00000541031 1031 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 AC120045.2-201ENST00000567334 178 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 AL033527.4-201ENST00000641026 673 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 AC091951.1-201ENST00000512854 2465 ntBASIC9.94□□□□□ -0.82
SCXQ7RTU7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC9.94□□□□□ -0.82
SCXQ7RTU7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms