Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 BTBD7P1-201ENST00000447253 1453 ntBASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 AC005562.1-201ENST00000583030 3219 ntBASIC13.8□□□□□ -0.2
TUBA1AQ71U36 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 GHSR-202ENST00000427970 912 ntBASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 TERF1P3-201ENST00000505638 1227 ntBASIC13.8□□□□□ -0.2
TUBA1AQ71U36 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 DOC2GP-202ENST00000514950 1163 ntBASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 TIMM17BP1-201ENST00000545713 516 ntBASIC13.8□□□□□ -0.2
TUBA1AQ71U36 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 SRD5A3P1-201ENST00000603021 949 ntBASIC13.8□□□□□ -0.2
TUBA1AQ71U36 AC009118.2-201ENST00000613275 655 ntBASIC13.8□□□□□ -0.2
TUBA1AQ71U36 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TUBA1AQ71U36 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 CICP11-201ENST00000434745 2827 ntBASIC13.79□□□□□ -0.2
TUBA1AQ71U36 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.79□□□□□ -0.2
TUBA1AQ71U36 SPTLC1P1-201ENST00000447199 261 ntBASIC13.79□□□□□ -0.2
TUBA1AQ71U36 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms