Protein–RNA interactions for Protein: Q6P3X8

PGBD2, PiggyBac transposable element-derived protein 2, humanhuman

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2Q6P3X8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PGBD2Q6P3X8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 AC079781.5-202ENST00000641784 3743 ntBASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 RN7SL832P-201ENST00000607781 1756 ntBASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 CICP16-201ENST00000502609 2813 ntBASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 AC004449.1-201ENST00000564240 433 ntBASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 AC092364.2-202ENST00000597012 1073 ntBASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 AL137784.3-201ENST00000623858 2288 ntBASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 MYADML-201ENST00000474610 2147 ntBASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PGBD2Q6P3X8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PGBD2Q6P3X8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms