Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 AC007326.2-201ENST00000624224 7579 ntBASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 AC106820.3-201ENST00000561653 397 ntBASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 RN7SL713P-201ENST00000582127 302 ntBASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 AC010328.2-201ENST00000597698 1111 ntBASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 TUBB1P2-201ENST00000422712 1306 ntBASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 TUBB1P1-201ENST00000503144 1300 ntBASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 AC018442.1-201ENST00000421439 2061 ntBASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 CNN2P10-201ENST00000443067 918 ntBASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 COX5BP1-201ENST00000507622 393 ntBASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 AP000593.2-201ENST00000542775 1433 ntBASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 C2orf69P2-201ENST00000562032 1123 ntBASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 OR10B1P-201ENST00000601666 907 ntBASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 ZACNP1-201ENST00000612259 710 ntBASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TTC39BQ5VTQ0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TTC39BQ5VTQ0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms