Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 AHCYP4-201ENST00000419201 1315 ntBASIC20.3■□□□□ 0.84
CDCA8Q53HL2 CYP4F23P-201ENST00000593402 1579 ntBASIC20.3■□□□□ 0.84
CDCA8Q53HL2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 AL805961.1-203ENST00000641078 1258 ntBASIC20.3■□□□□ 0.84
CDCA8Q53HL2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA8Q53HL2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.29■□□□□ 0.84
CDCA8Q53HL2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 HIST2H2BC-201ENST00000498492 580 ntBASIC20.29■□□□□ 0.84
CDCA8Q53HL2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 SORD2P-201ENST00000558556 1069 ntBASIC20.29■□□□□ 0.84
CDCA8Q53HL2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 TSPY26P-202ENST00000565928 3884 ntBASIC20.29■□□□□ 0.84
CDCA8Q53HL2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC20.29■□□□□ 0.84
CDCA8Q53HL2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 RN7SKP214-201ENST00000364208 315 ntBASIC20.28■□□□□ 0.84
CDCA8Q53HL2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 XBP1P1-201ENST00000436573 652 ntBASIC20.28■□□□□ 0.84
CDCA8Q53HL2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA8Q53HL2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms