Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 AC023908.3-201ENST00000564211 3047 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 AL157407.1-201ENST00000435784 904 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 RPL18P13-201ENST00000478088 569 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 AC245884.6-201ENST00000515672 1067 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 AL132994.2-201ENST00000603120 687 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 AC064801.2-201ENST00000625052 1303 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 FAM90A7P-201ENST00000382628 1395 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 FAM90A23P-201ENST00000400136 1395 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 AC007274.2-201ENST00000421675 662 ntBASIC17.73■□□□□ 0.43
RFX7Q2KHR2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.73■□□□□ 0.43
RFX7Q2KHR2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 AL161670.2-201ENST00000557650 1227 ntBASIC17.73■□□□□ 0.43
RFX7Q2KHR2 SNORD3B-2-202ENST00000571722 791 ntBASIC17.73■□□□□ 0.43
RFX7Q2KHR2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 AL805961.1-203ENST00000641078 1258 ntBASIC17.73■□□□□ 0.43
RFX7Q2KHR2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX7Q2KHR2 HSPA7-201ENST00000445535 1927 ntBASIC17.72■□□□□ 0.43
RFX7Q2KHR2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.72■□□□□ 0.43
RFX7Q2KHR2 RN7SL163P-201ENST00000583100 276 ntBASIC17.72■□□□□ 0.43
RFX7Q2KHR2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms