Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RSPO4Q2I0M5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
RSPO4Q2I0M5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AL138725.1-201ENST00000407347 1314 ntBASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AL157414.3-201ENST00000624276 1954 ntBASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 NIFKP4-201ENST00000567275 1192 ntBASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 AC254633.1-201ENST00000606790 345 ntBASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RSPO4Q2I0M5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 RPL18AP8-201ENST00000486071 528 ntBASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 AC090136.2-201ENST00000517809 420 ntBASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 URB1-AS1-201ENST00000534991 831 ntBASIC14.19□□□□□ -0.14
RSPO4Q2I0M5 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms