Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC21.27■■□□□ 1
ATP7AQ04656 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ATP7AQ04656 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ATP7AQ04656 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.27■■□□□ 1
ATP7AQ04656 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP7AQ04656 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP7AQ04656 AMT-256ENST00000638063 1783 ntTSL 5 BASIC21.27■□□□□ 0.99
ATP7AQ04656 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
ATP7AQ04656 ZEB1-AS1-208ENST00000607166 2503 ntBASIC21.26■□□□□ 0.99
ATP7AQ04656 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATP7AQ04656 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP7AQ04656 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ATP7AQ04656 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 AL451000.1-201ENST00000451300 1186 ntBASIC21.26■□□□□ 0.99
ATP7AQ04656 RN7SL147P-201ENST00000487345 298 ntBASIC21.26■□□□□ 0.99
ATP7AQ04656 SLC25A15P3-201ENST00000505530 290 ntBASIC21.26■□□□□ 0.99
ATP7AQ04656 RN7SKP155-201ENST00000516031 288 ntBASIC21.26■□□□□ 0.99
ATP7AQ04656 AC090136.2-201ENST00000517809 420 ntBASIC21.26■□□□□ 0.99
ATP7AQ04656 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ATP7AQ04656 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 AC148477.9-201ENST00000623974 539 ntBASIC21.26■□□□□ 0.99
ATP7AQ04656 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ATP7AQ04656 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 MYADML-201ENST00000474610 2147 ntBASIC21.26■□□□□ 0.99
ATP7AQ04656 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP7AQ04656 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ATP7AQ04656 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 PARN-202ENST00000420015 2360 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP7AQ04656 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP7AQ04656 AC091951.1-201ENST00000512854 2465 ntBASIC21.26■□□□□ 0.99
ATP7AQ04656 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP7AQ04656 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP7AQ04656 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP7AQ04656 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP7AQ04656 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
ATP7AQ04656 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP7AQ04656 MIR5001-201ENST00000580185 100 ntBASIC21.25■□□□□ 0.99
ATP7AQ04656 MBP-238ENST00000580402 915 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP7AQ04656 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
ATP7AQ04656 AL160191.2-201ENST00000603975 601 ntBASIC21.25■□□□□ 0.99
ATP7AQ04656 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC21.25■□□□□ 0.99
ATP7AQ04656 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP7AQ04656 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP7AQ04656 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP7AQ04656 AL354702.1-201ENST00000442006 1960 ntBASIC21.25■□□□□ 0.99
ATP7AQ04656 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP7AQ04656 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
ATP7AQ04656 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP7AQ04656 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ATP7AQ04656 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP7AQ04656 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 AC022080.1-201ENST00000366255 781 ntBASIC21.24■□□□□ 0.99
ATP7AQ04656 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP7AQ04656 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP7AQ04656 PSAT1P2-201ENST00000426107 972 ntBASIC21.24■□□□□ 0.99
ATP7AQ04656 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP7AQ04656 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP7AQ04656 RN7SL375P-201ENST00000492442 298 ntBASIC21.24■□□□□ 0.99
ATP7AQ04656 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP7AQ04656 AC023968.2-201ENST00000560593 1049 ntBASIC21.24■□□□□ 0.99
ATP7AQ04656 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATP7AQ04656 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ATP7AQ04656 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP7AQ04656 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP7AQ04656 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 AC004554.1-201ENST00000422830 1468 ntBASIC21.24■□□□□ 0.99
ATP7AQ04656 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP7AQ04656 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP7AQ04656 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP7AQ04656 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP7AQ04656 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ATP7AQ04656 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP7AQ04656 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP7AQ04656 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP7AQ04656 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ATP7AQ04656 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC21.24■□□□□ 0.99
ATP7AQ04656 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATP7AQ04656 AC068831.5-201ENST00000557387 328 ntBASIC21.24■□□□□ 0.99
ATP7AQ04656 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms