Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMGCS1Q01581 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.33□□□□□ -0.11
HMGCS1Q01581 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMGCS1Q01581 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMGCS1Q01581 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
HMGCS1Q01581 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMGCS1Q01581 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMGCS1Q01581 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMGCS1Q01581 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HMGCS1Q01581 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
HMGCS1Q01581 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 ACKR1-201ENST00000368121 1240 ntBASIC14.33□□□□□ -0.12
HMGCS1Q01581 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 AL162726.2-201ENST00000438986 1017 ntBASIC14.33□□□□□ -0.12
HMGCS1Q01581 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 AC190387.1-201ENST00000551683 408 ntBASIC14.33□□□□□ -0.12
HMGCS1Q01581 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 AC104581.4-201ENST00000623126 3052 ntBASIC14.33□□□□□ -0.12
HMGCS1Q01581 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.33□□□□□ -0.12
HMGCS1Q01581 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCS1Q01581 AC010327.5-201ENST00000586923 3061 ntBASIC14.33□□□□□ -0.12
HMGCS1Q01581 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 TLE1P1-201ENST00000422965 589 ntBASIC14.32□□□□□ -0.12
HMGCS1Q01581 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 CRB3P1-201ENST00000449338 276 ntBASIC14.32□□□□□ -0.12
HMGCS1Q01581 AC022137.2-201ENST00000503482 481 ntBASIC14.32□□□□□ -0.12
HMGCS1Q01581 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCS1Q01581 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCS1Q01581 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms