Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 AC015688.4-201ENST00000580780 1647 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 AC004945.1-201ENST00000416738 983 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 COX5BP8-201ENST00000416911 349 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 C2orf27AP3-201ENST00000434123 579 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 PUDPP3-201ENST00000445368 636 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 BCRP2-202ENST00000447763 634 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 BCRP6-201ENST00000510112 632 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 BCRP7-201ENST00000511549 544 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 ECM1P1-201ENST00000604092 1279 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 AL354718.3-201ENST00000616414 581 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 IGHV3-72-202ENST00000621503 303 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 CR382287.1-201ENST00000623954 586 ntBASIC12.96□□□□□ -0.33
HIST1H3AP68431 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.96□□□□□ -0.33
HIST1H3AP68431 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H3AP68431 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H3AP68431 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HIST1H3AP68431 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
HIST1H3AP68431 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H3AP68431 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.96□□□□□ -0.34
HIST1H3AP68431 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H3AP68431 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.96□□□□□ -0.34
HIST1H3AP68431 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.96□□□□□ -0.34
HIST1H3AP68431 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HIST1H3AP68431 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H3AP68431 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H3AP68431 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H3AP68431 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
HIST1H3AP68431 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HIST1H3AP68431 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H3AP68431 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HIST1H3AP68431 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.95□□□□□ -0.34
HIST1H3AP68431 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 AC009093.2-202ENST00000620513 2079 ntBASIC12.95□□□□□ -0.34
HIST1H3AP68431 AC215219.1-201ENST00000400706 1817 ntBASIC12.95□□□□□ -0.34
HIST1H3AP68431 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 TMEM14DP-201ENST00000422205 345 ntBASIC12.95□□□□□ -0.34
HIST1H3AP68431 AC016694.1-201ENST00000434179 700 ntBASIC12.95□□□□□ -0.34
HIST1H3AP68431 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 FTH1P14-201ENST00000482930 551 ntBASIC12.95□□□□□ -0.34
HIST1H3AP68431 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HIST1H3AP68431 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HIST1H3AP68431 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms