Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.96□□□□□ -0.17
TRA2BP62995 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRA2BP62995 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.96□□□□□ -0.17
TRA2BP62995 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.96□□□□□ -0.17
TRA2BP62995 AC020910.6-201ENST00000623084 1459 ntBASIC13.96□□□□□ -0.17
TRA2BP62995 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.96□□□□□ -0.17
TRA2BP62995 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRA2BP62995 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.96□□□□□ -0.17
TRA2BP62995 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.96□□□□□ -0.17
TRA2BP62995 RPL7P3-201ENST00000441388 714 ntBASIC13.96□□□□□ -0.17
TRA2BP62995 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.96□□□□□ -0.17
TRA2BP62995 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.96□□□□□ -0.17
TRA2BP62995 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.96□□□□□ -0.17
TRA2BP62995 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.96□□□□□ -0.17
TRA2BP62995 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRA2BP62995 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.96□□□□□ -0.17
TRA2BP62995 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.96□□□□□ -0.17
TRA2BP62995 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.96□□□□□ -0.17
TRA2BP62995 C2orf69P2-201ENST00000562032 1123 ntBASIC13.96□□□□□ -0.17
TRA2BP62995 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.96□□□□□ -0.17
TRA2BP62995 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.96□□□□□ -0.17
TRA2BP62995 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.96□□□□□ -0.17
TRA2BP62995 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.96□□□□□ -0.17
TRA2BP62995 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRA2BP62995 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRA2BP62995 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.96□□□□□ -0.18
TRA2BP62995 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRA2BP62995 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRA2BP62995 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRA2BP62995 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRA2BP62995 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.96□□□□□ -0.18
TRA2BP62995 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.96□□□□□ -0.18
TRA2BP62995 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRA2BP62995 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.95□□□□□ -0.18
TRA2BP62995 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.95□□□□□ -0.18
TRA2BP62995 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRA2BP62995 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 AC136759.1-202ENST00000530858 2194 ntBASIC13.95□□□□□ -0.18
TRA2BP62995 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.95□□□□□ -0.18
TRA2BP62995 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.95□□□□□ -0.18
TRA2BP62995 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.95□□□□□ -0.18
TRA2BP62995 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.95□□□□□ -0.18
TRA2BP62995 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.95□□□□□ -0.18
TRA2BP62995 AC027237.1-201ENST00000560942 655 ntBASIC13.95□□□□□ -0.18
TRA2BP62995 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.95□□□□□ -0.18
TRA2BP62995 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRA2BP62995 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.95□□□□□ -0.18
TRA2BP62995 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.95□□□□□ -0.18
TRA2BP62995 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 AC027601.3-201ENST00000622907 509 ntBASIC13.95□□□□□ -0.18
TRA2BP62995 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 AC015656.1-201ENST00000624209 3578 ntBASIC13.95□□□□□ -0.18
TRA2BP62995 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.95□□□□□ -0.18
TRA2BP62995 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.95□□□□□ -0.18
TRA2BP62995 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRA2BP62995 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms