Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN2P57739 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN2P57739 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDN2P57739 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN2P57739 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN2P57739 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDN2P57739 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CLDN2P57739 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN2P57739 AC092506.1-202ENST00000401022 528 ntBASIC14.58□□□□□ -0.08
CLDN2P57739 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 ISCA2P1-201ENST00000425548 448 ntBASIC14.58□□□□□ -0.08
CLDN2P57739 AL035414.1-201ENST00000451327 857 ntBASIC14.58□□□□□ -0.08
CLDN2P57739 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.58□□□□□ -0.08
CLDN2P57739 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN2P57739 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN2P57739 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CLDN2P57739 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CLDN2P57739 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLDN2P57739 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.58□□□□□ -0.08
CLDN2P57739 AP000346.4-201ENST00000614827 381 ntBASIC14.58□□□□□ -0.08
CLDN2P57739 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CLDN2P57739 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDN2P57739 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.58□□□□□ -0.08
CLDN2P57739 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 AC144522.1-201ENST00000625111 1658 ntBASIC14.58□□□□□ -0.08
CLDN2P57739 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN2P57739 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN2P57739 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CLDN2P57739 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN2P57739 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN2P57739 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN2P57739 AL596276.2-201ENST00000447525 331 ntBASIC14.57□□□□□ -0.08
CLDN2P57739 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN2P57739 AC006122.1-201ENST00000493323 440 ntBASIC14.57□□□□□ -0.08
CLDN2P57739 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN2P57739 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CLDN2P57739 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN2P57739 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN2P57739 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN2P57739 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN2P57739 MIR3907-201ENST00000579424 151 ntBASIC14.57□□□□□ -0.08
CLDN2P57739 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN2P57739 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN2P57739 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.57□□□□□ -0.08
CLDN2P57739 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN2P57739 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN2P57739 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN2P57739 MRPL37P1-201ENST00000592451 1337 ntBASIC14.57□□□□□ -0.08
CLDN2P57739 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN2P57739 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLDN2P57739 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CLDN2P57739 TNRC18P2-201ENST00000417666 2714 ntBASIC14.57□□□□□ -0.08
CLDN2P57739 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN2P57739 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN2P57739 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.56□□□□□ -0.08
CLDN2P57739 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 CYP4F23P-201ENST00000593402 1579 ntBASIC14.56□□□□□ -0.08
CLDN2P57739 LINC02228-204ENST00000642115 2962 ntBASIC14.56□□□□□ -0.08
CLDN2P57739 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms