Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RIPPLY3P57055 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RIPPLY3P57055 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
RIPPLY3P57055 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RIPPLY3P57055 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.4□□□□□ -0.42
RIPPLY3P57055 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
RIPPLY3P57055 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.4□□□□□ -0.42
RIPPLY3P57055 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
RIPPLY3P57055 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RIPPLY3P57055 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RIPPLY3P57055 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RIPPLY3P57055 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.4□□□□□ -0.43
RIPPLY3P57055 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
RIPPLY3P57055 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
RIPPLY3P57055 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
RIPPLY3P57055 AL136982.4-201ENST00000437689 1740 ntBASIC12.4□□□□□ -0.43
RIPPLY3P57055 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.4□□□□□ -0.43
RIPPLY3P57055 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
RIPPLY3P57055 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 BX088651.3-201ENST00000418155 352 ntBASIC12.39□□□□□ -0.43
RIPPLY3P57055 AC026320.2-201ENST00000434379 478 ntBASIC12.39□□□□□ -0.43
RIPPLY3P57055 AL356000.1-201ENST00000441073 1238 ntBASIC12.39□□□□□ -0.43
RIPPLY3P57055 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 MIR3677-201ENST00000578964 60 ntBASIC12.39□□□□□ -0.43
RIPPLY3P57055 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC12.39□□□□□ -0.43
RIPPLY3P57055 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.39□□□□□ -0.43
RIPPLY3P57055 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RIPPLY3P57055 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 FAM45BP-202ENST00000592932 1624 ntBASIC12.38□□□□□ -0.43
RIPPLY3P57055 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RIPPLY3P57055 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.38□□□□□ -0.43
RIPPLY3P57055 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms