Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
CMC4P56277 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.04□□□□□ -0.64
CMC4P56277 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC11.04□□□□□ -0.64
CMC4P56277 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.04□□□□□ -0.64
CMC4P56277 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.04□□□□□ -0.64
CMC4P56277 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.04□□□□□ -0.64
CMC4P56277 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.04□□□□□ -0.64
CMC4P56277 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CMC4P56277 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 FGD5P1-202ENST00000614866 2498 ntBASIC11.04□□□□□ -0.64
CMC4P56277 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.04□□□□□ -0.64
CMC4P56277 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CMC4P56277 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.04□□□□□ -0.64
CMC4P56277 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.04□□□□□ -0.64
CMC4P56277 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CMC4P56277 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CMC4P56277 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.04□□□□□ -0.64
CMC4P56277 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CMC4P56277 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.04□□□□□ -0.64
CMC4P56277 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.04□□□□□ -0.64
CMC4P56277 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.04□□□□□ -0.64
CMC4P56277 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CMC4P56277 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
CMC4P56277 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 AJ011931.1-201ENST00000618749 2492 ntBASIC11.03□□□□□ -0.64
CMC4P56277 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CMC4P56277 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CMC4P56277 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CMC4P56277 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CMC4P56277 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CMC4P56277 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.03□□□□□ -0.64
CMC4P56277 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CMC4P56277 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC11.03□□□□□ -0.64
CMC4P56277 AC010141.1-201ENST00000411585 623 ntBASIC11.03□□□□□ -0.64
CMC4P56277 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 AC012441.2-201ENST00000444843 739 ntBASIC11.03□□□□□ -0.64
CMC4P56277 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.03□□□□□ -0.64
CMC4P56277 TPT1P11-201ENST00000458482 498 ntBASIC11.03□□□□□ -0.64
CMC4P56277 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.03□□□□□ -0.64
CMC4P56277 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CMC4P56277 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.03□□□□□ -0.64
CMC4P56277 FAM8A2P-201ENST00000528813 1142 ntBASIC11.03□□□□□ -0.64
CMC4P56277 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.03□□□□□ -0.64
CMC4P56277 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.03□□□□□ -0.64
CMC4P56277 SNX29P1-201ENST00000548357 1007 ntBASIC11.03□□□□□ -0.64
CMC4P56277 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 DUX4L46-201ENST00000566845 751 ntBASIC11.03□□□□□ -0.64
CMC4P56277 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CMC4P56277 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.03□□□□□ -0.64
CMC4P56277 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CMC4P56277 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC11.03□□□□□ -0.64
CMC4P56277 AC131212.3-201ENST00000624087 4219 ntBASIC11.03□□□□□ -0.64
CMC4P56277 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
CMC4P56277 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CMC4P56277 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CMC4P56277 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CMC4P56277 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms