Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK2P53671 AP000812.2-201ENST00000538934 718 ntBASIC14.98□□□□□ -0.01
LIMK2P53671 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK2P53671 AL583810.1-201ENST00000553344 1045 ntBASIC14.98□□□□□ -0.01
LIMK2P53671 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK2P53671 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.98□□□□□ -0.01
LIMK2P53671 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK2P53671 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK2P53671 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK2P53671 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK2P53671 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LIMK2P53671 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LIMK2P53671 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK2P53671 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.98□□□□□ -0.01
LIMK2P53671 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 MSTO2P-201ENST00000314835 1709 ntBASIC14.97□□□□□ -0.01
LIMK2P53671 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.97□□□□□ -0.01
LIMK2P53671 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 FAM86MP-201ENST00000340703 885 ntBASIC14.97□□□□□ -0.01
LIMK2P53671 RNU1-114P-201ENST00000365297 166 ntBASIC14.97□□□□□ -0.01
LIMK2P53671 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.97□□□□□ -0.01
LIMK2P53671 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.97□□□□□ -0.01
LIMK2P53671 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LIMK2P53671 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.97□□□□□ -0.01
LIMK2P53671 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LIMK2P53671 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 FTH1P14-201ENST00000482930 551 ntBASIC14.97□□□□□ -0.01
LIMK2P53671 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.97□□□□□ -0.01
LIMK2P53671 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.97□□□□□ -0.01
LIMK2P53671 RNA5SP412-201ENST00000516234 123 ntBASIC14.97□□□□□ -0.01
LIMK2P53671 AC022616.1-201ENST00000518688 554 ntBASIC14.97□□□□□ -0.01
LIMK2P53671 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.97□□□□□ -0.01
LIMK2P53671 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LIMK2P53671 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.97□□□□□ -0.01
LIMK2P53671 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK2P53671 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK2P53671 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LIMK2P53671 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
LIMK2P53671 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LIMK2P53671 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms