Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HMGA2P52926 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.51□□□□□ -0.25
HMGA2P52926 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.51□□□□□ -0.25
HMGA2P52926 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.51□□□□□ -0.25
HMGA2P52926 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
HMGA2P52926 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HMGA2P52926 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.51□□□□□ -0.25
HMGA2P52926 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.51□□□□□ -0.25
HMGA2P52926 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.51□□□□□ -0.25
HMGA2P52926 AC055876.3-201ENST00000431496 288 ntBASIC13.51□□□□□ -0.25
HMGA2P52926 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 DUX4L27-201ENST00000554796 1261 ntBASIC13.51□□□□□ -0.25
HMGA2P52926 AC138649.4-201ENST00000612222 287 ntBASIC13.51□□□□□ -0.25
HMGA2P52926 AC079781.4-201ENST00000641908 219 ntBASIC13.51□□□□□ -0.25
HMGA2P52926 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HMGA2P52926 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HMGA2P52926 AC099521.3-201ENST00000624251 2938 ntBASIC13.51□□□□□ -0.25
HMGA2P52926 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HMGA2P52926 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HMGA2P52926 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.51□□□□□ -0.25
HMGA2P52926 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HMGA2P52926 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HMGA2P52926 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMGA2P52926 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
HMGA2P52926 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HMGA2P52926 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.5□□□□□ -0.25
HMGA2P52926 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HMGA2P52926 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HMGA2P52926 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.5□□□□□ -0.25
HMGA2P52926 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.5□□□□□ -0.25
HMGA2P52926 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 SPDYE19P-201ENST00000338590 713 ntBASIC13.5□□□□□ -0.25
HMGA2P52926 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.5□□□□□ -0.25
HMGA2P52926 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.5□□□□□ -0.25
HMGA2P52926 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.5□□□□□ -0.25
HMGA2P52926 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 MESTP3-201ENST00000503460 968 ntBASIC13.5□□□□□ -0.25
HMGA2P52926 AC104596.2-201ENST00000512793 793 ntBASIC13.5□□□□□ -0.25
HMGA2P52926 IGHV3-42-201ENST00000520410 361 ntBASIC13.5□□□□□ -0.25
HMGA2P52926 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.5□□□□□ -0.25
HMGA2P52926 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
HMGA2P52926 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.5□□□□□ -0.25
HMGA2P52926 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HMGA2P52926 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HMGA2P52926 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.5□□□□□ -0.25
HMGA2P52926 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HMGA2P52926 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms