Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.94■□□□□ 0.3
CLCN1P35523 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLCN1P35523 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLCN1P35523 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN1P35523 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 AC107375.1-201ENST00000564464 2231 ntBASIC16.93■□□□□ 0.3
CLCN1P35523 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CLCN1P35523 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC16.93■□□□□ 0.3
CLCN1P35523 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.93■□□□□ 0.3
CLCN1P35523 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC16.93■□□□□ 0.3
CLCN1P35523 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CLCN1P35523 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CLCN1P35523 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLCN1P35523 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.93■□□□□ 0.3
CLCN1P35523 TSEN15P1-201ENST00000423257 515 ntBASIC16.93■□□□□ 0.3
CLCN1P35523 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.93■□□□□ 0.3
CLCN1P35523 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CLCN1P35523 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.93■□□□□ 0.3
CLCN1P35523 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CLCN1P35523 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC16.93■□□□□ 0.3
CLCN1P35523 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLCN1P35523 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLCN1P35523 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.93■□□□□ 0.3
CLCN1P35523 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC16.93■□□□□ 0.3
CLCN1P35523 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLCN1P35523 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CLCN1P35523 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCN1P35523 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.92■□□□□ 0.3
CLCN1P35523 AL031719.1-201ENST00000623365 2587 ntBASIC16.92■□□□□ 0.3
CLCN1P35523 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC16.92■□□□□ 0.3
CLCN1P35523 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.92■□□□□ 0.3
CLCN1P35523 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CLCN1P35523 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.92■□□□□ 0.3
CLCN1P35523 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.92■□□□□ 0.3
CLCN1P35523 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLCN1P35523 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLCN1P35523 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLCN1P35523 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLCN1P35523 GHSR-202ENST00000427970 912 ntBASIC16.92■□□□□ 0.3
CLCN1P35523 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.92■□□□□ 0.3
CLCN1P35523 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.92■□□□□ 0.3
CLCN1P35523 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.92■□□□□ 0.3
CLCN1P35523 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLCN1P35523 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.92■□□□□ 0.3
CLCN1P35523 POM121L14P-201ENST00000406100 1558 ntBASIC16.92■□□□□ 0.3
CLCN1P35523 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CLCN1P35523 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CLCN1P35523 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.92■□□□□ 0.3
CLCN1P35523 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CLCN1P35523 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLCN1P35523 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCN1P35523 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.91■□□□□ 0.3
CLCN1P35523 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC16.91■□□□□ 0.3
CLCN1P35523 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CLCN1P35523 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLCN1P35523 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms