Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 MIR663B-201ENST00000408361 115 ntBASIC14.1□□□□□ -0.15
MMP11P24347 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.1□□□□□ -0.15
MMP11P24347 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.1□□□□□ -0.15
MMP11P24347 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.1□□□□□ -0.15
MMP11P24347 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 POM121L10P-201ENST00000436994 1285 ntBASIC14.1□□□□□ -0.15
MMP11P24347 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 AC026434.2-201ENST00000506094 1078 ntBASIC14.1□□□□□ -0.15
MMP11P24347 ZNF767P-206ENST00000513792 565 ntBASIC14.1□□□□□ -0.15
MMP11P24347 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.1□□□□□ -0.15
MMP11P24347 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
MMP11P24347 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 KRT8P4-201ENST00000509735 1454 ntBASIC14.1□□□□□ -0.15
MMP11P24347 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
MMP11P24347 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 BX640514.1-201ENST00000583223 1918 ntBASIC14.09□□□□□ -0.15
MMP11P24347 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
MMP11P24347 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MMP11P24347 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.09□□□□□ -0.15
MMP11P24347 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 AL136309.1-201ENST00000403917 691 ntBASIC14.09□□□□□ -0.15
MMP11P24347 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.09□□□□□ -0.15
MMP11P24347 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 AP003171.2-201ENST00000528208 925 ntBASIC14.09□□□□□ -0.15
MMP11P24347 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 AC004466.1-201ENST00000599515 1080 ntBASIC14.09□□□□□ -0.15
MMP11P24347 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
MMP11P24347 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.09□□□□□ -0.15
MMP11P24347 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.09□□□□□ -0.15
MMP11P24347 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
MMP11P24347 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MMP11P24347 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MMP11P24347 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MMP11P24347 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.09□□□□□ -0.15
MMP11P24347 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MMP11P24347 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.09□□□□□ -0.15
MMP11P24347 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MMP11P24347 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
MMP11P24347 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.08□□□□□ -0.15
MMP11P24347 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
MMP11P24347 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms