Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC010141.1-201ENST00000411585 623 ntBASIC17.18■□□□□ 0.34
ERCC3P19447 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.18■□□□□ 0.34
ERCC3P19447 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ERCC3P19447 MIR4722-201ENST00000578292 60 ntBASIC17.18■□□□□ 0.34
ERCC3P19447 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.18■□□□□ 0.34
ERCC3P19447 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.18■□□□□ 0.34
ERCC3P19447 AC090164.2-201ENST00000611487 516 ntBASIC17.18■□□□□ 0.34
ERCC3P19447 AC079336.7-201ENST00000623428 1078 ntBASIC17.18■□□□□ 0.34
ERCC3P19447 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC3P19447 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC3P19447 AC106881.1-201ENST00000605849 3329 ntBASIC17.18■□□□□ 0.34
ERCC3P19447 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC3P19447 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 AC023024.2-201ENST00000623561 1993 ntBASIC17.18■□□□□ 0.34
ERCC3P19447 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC3P19447 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC3P19447 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
ERCC3P19447 AC012508.2-201ENST00000567613 1472 ntBASIC17.18■□□□□ 0.34
ERCC3P19447 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC3P19447 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC3P19447 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ERCC3P19447 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 RN7SKP230-201ENST00000365642 335 ntBASIC17.17■□□□□ 0.34
ERCC3P19447 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ERCC3P19447 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC3P19447 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.17■□□□□ 0.34
ERCC3P19447 PUDPP3-201ENST00000445368 636 ntBASIC17.17■□□□□ 0.34
ERCC3P19447 RPL18P13-201ENST00000478088 569 ntBASIC17.17■□□□□ 0.34
ERCC3P19447 TMEM198B-204ENST00000484016 896 ntBASIC17.17■□□□□ 0.34
ERCC3P19447 AC125604.1-201ENST00000496255 707 ntBASIC17.17■□□□□ 0.34
ERCC3P19447 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC3P19447 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC3P19447 AL161670.2-201ENST00000557650 1227 ntBASIC17.17■□□□□ 0.34
ERCC3P19447 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.17■□□□□ 0.34
ERCC3P19447 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.17■□□□□ 0.34
ERCC3P19447 AL133499.1-201ENST00000596207 608 ntBASIC17.17■□□□□ 0.34
ERCC3P19447 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.17■□□□□ 0.34
ERCC3P19447 AF254983.2-201ENST00000612331 135 ntBASIC17.17■□□□□ 0.34
ERCC3P19447 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC3P19447 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ERCC3P19447 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC3P19447 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ERCC3P19447 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ERCC3P19447 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
ERCC3P19447 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ERCC3P19447 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC3P19447 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC3P19447 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ERCC3P19447 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC3P19447 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.16■□□□□ 0.34
ERCC3P19447 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC3P19447 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC3P19447 MPRIPP1-201ENST00000452433 1089 ntBASIC17.16■□□□□ 0.34
ERCC3P19447 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC3P19447 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.16■□□□□ 0.34
ERCC3P19447 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.16■□□□□ 0.34
ERCC3P19447 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC3P19447 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC3P19447 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.16■□□□□ 0.34
ERCC3P19447 AL136295.7-201ENST00000619226 1200 ntBASIC17.16■□□□□ 0.34
ERCC3P19447 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC3P19447 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms