Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.45□□□□□ -0.1
KRT6AP02538 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.44□□□□□ -0.1
KRT6AP02538 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.44□□□□□ -0.1
KRT6AP02538 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.44□□□□□ -0.1
KRT6AP02538 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
KRT6AP02538 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.44□□□□□ -0.1
KRT6AP02538 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.44□□□□□ -0.1
KRT6AP02538 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.44□□□□□ -0.1
KRT6AP02538 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
KRT6AP02538 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.44□□□□□ -0.1
KRT6AP02538 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 AL162726.2-201ENST00000438986 1017 ntBASIC14.44□□□□□ -0.1
KRT6AP02538 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.44□□□□□ -0.1
KRT6AP02538 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.44□□□□□ -0.1
KRT6AP02538 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.44□□□□□ -0.1
KRT6AP02538 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.44□□□□□ -0.1
KRT6AP02538 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
KRT6AP02538 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.44□□□□□ -0.1
KRT6AP02538 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.44□□□□□ -0.1
KRT6AP02538 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.44□□□□□ -0.1
KRT6AP02538 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.44□□□□□ -0.1
KRT6AP02538 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
KRT6AP02538 AC092364.2-202ENST00000597012 1073 ntBASIC14.44□□□□□ -0.1
KRT6AP02538 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.44□□□□□ -0.1
KRT6AP02538 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
KRT6AP02538 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
KRT6AP02538 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
KRT6AP02538 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.44□□□□□ -0.1
KRT6AP02538 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KRT6AP02538 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KRT6AP02538 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
KRT6AP02538 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.43□□□□□ -0.1
KRT6AP02538 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
KRT6AP02538 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.43□□□□□ -0.1
KRT6AP02538 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
KRT6AP02538 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.43□□□□□ -0.1
KRT6AP02538 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
KRT6AP02538 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KRT6AP02538 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.43□□□□□ -0.1
KRT6AP02538 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.43□□□□□ -0.1
KRT6AP02538 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.43□□□□□ -0.1
KRT6AP02538 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.43□□□□□ -0.1
KRT6AP02538 CHCHD2P3-201ENST00000603038 451 ntBASIC14.43□□□□□ -0.1
KRT6AP02538 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.43□□□□□ -0.1
KRT6AP02538 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.43□□□□□ -0.1
KRT6AP02538 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KRT6AP02538 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.43□□□□□ -0.1
KRT6AP02538 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
KRT6AP02538 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.43□□□□□ -0.1
KRT6AP02538 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
KRT6AP02538 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.43□□□□□ -0.1
KRT6AP02538 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.43□□□□□ -0.1
KRT6AP02538 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRT6AP02538 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6AP02538 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6AP02538 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.42□□□□□ -0.1
KRT6AP02538 KRT8P35-201ENST00000483942 1338 ntBASIC14.42□□□□□ -0.1
KRT6AP02538 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6AP02538 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
KRT6AP02538 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KRT6AP02538 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
KRT6AP02538 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms