Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RN7SKP155-201ENST00000516031 288 ntBASIC6.39□□□□□ -1.39
USH2AO75445 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 KLF17P1-201ENST00000547105 1126 ntBASIC6.39□□□□□ -1.39
USH2AO75445 AP000845.1-201ENST00000581677 2131 ntBASIC6.39□□□□□ -1.39
USH2AO75445 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 AL136982.5-201ENST00000605222 294 ntBASIC6.39□□□□□ -1.39
USH2AO75445 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
USH2AO75445 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 ASS1P1-201ENST00000402854 1237 ntBASIC6.39□□□□□ -1.39
USH2AO75445 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
USH2AO75445 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 AC233724.9-201ENST00000511694 407 ntBASIC6.39□□□□□ -1.39
USH2AO75445 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC6.39□□□□□ -1.39
USH2AO75445 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 RN7SL480P-201ENST00000581481 294 ntBASIC6.39□□□□□ -1.39
USH2AO75445 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC6.39□□□□□ -1.39
USH2AO75445 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC6.39□□□□□ -1.39
USH2AO75445 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
USH2AO75445 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 AC023090.2-201ENST00000625182 2110 ntBASIC6.39□□□□□ -1.39
USH2AO75445 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 TLE1P1-201ENST00000422965 589 ntBASIC6.39□□□□□ -1.39
USH2AO75445 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC6.39□□□□□ -1.39
USH2AO75445 PTPA-215ENST00000432124 567 ntTSL 4 BASIC6.39□□□□□ -1.39
USH2AO75445 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC6.39□□□□□ -1.39
USH2AO75445 RN7SL788P-201ENST00000460504 316 ntBASIC6.39□□□□□ -1.39
USH2AO75445 NDUFB10P1-201ENST00000567319 521 ntBASIC6.39□□□□□ -1.39
USH2AO75445 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC6.39□□□□□ -1.39
USH2AO75445 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 TPT1P9-201ENST00000413759 514 ntBASIC6.38□□□□□ -1.39
USH2AO75445 RNU1-80P-201ENST00000459500 161 ntBASIC6.38□□□□□ -1.39
USH2AO75445 PARVG-208ENST00000466375 820 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC6.38□□□□□ -1.39
USH2AO75445 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC6.38□□□□□ -1.39
USH2AO75445 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC6.38□□□□□ -1.39
USH2AO75445 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 MIR4265-201ENST00000582152 99 ntBASIC6.38□□□□□ -1.39
USH2AO75445 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 PCDHGB8P-201ENST00000502926 1973 ntBASIC6.38□□□□□ -1.39
USH2AO75445 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms