Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A1O14983 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 LINC00554-201ENST00000564841 3011 ntBASIC16.9■□□□□ 0.3
ATP2A1O14983 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A1O14983 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 TMBIM7P-202ENST00000641474 1516 ntBASIC16.9■□□□□ 0.3
ATP2A1O14983 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A1O14983 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A1O14983 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2A1O14983 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2A1O14983 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ATP2A1O14983 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP2A1O14983 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.89■□□□□ 0.3
ATP2A1O14983 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.89■□□□□ 0.3
ATP2A1O14983 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP2A1O14983 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP2A1O14983 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ATP2A1O14983 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.3
ATP2A1O14983 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ATP2A1O14983 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A1O14983 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP2A1O14983 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATP2A1O14983 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ATP2A1O14983 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
ATP2A1O14983 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A1O14983 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP2A1O14983 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.89■□□□□ 0.29
ATP2A1O14983 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.89■□□□□ 0.29
ATP2A1O14983 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP2A1O14983 RTN3P1-201ENST00000536295 711 ntBASIC16.89■□□□□ 0.29
ATP2A1O14983 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.89■□□□□ 0.29
ATP2A1O14983 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.89■□□□□ 0.29
ATP2A1O14983 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ATP2A1O14983 AL353726.2-201ENST00000623259 884 ntBASIC16.89■□□□□ 0.29
ATP2A1O14983 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP2A1O14983 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP2A1O14983 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATP2A1O14983 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATP2A1O14983 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP2A1O14983 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP2A1O14983 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ATP2A1O14983 AC104640.1-201ENST00000562617 2109 ntBASIC16.88■□□□□ 0.29
ATP2A1O14983 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
ATP2A1O14983 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A1O14983 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ATP2A1O14983 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A1O14983 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.88■□□□□ 0.29
ATP2A1O14983 MIR33B-201ENST00000385104 96 ntBASIC16.88■□□□□ 0.29
ATP2A1O14983 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 KRT18P36-201ENST00000411618 1276 ntBASIC16.88■□□□□ 0.29
ATP2A1O14983 FXNP2-201ENST00000411625 547 ntBASIC16.88■□□□□ 0.29
ATP2A1O14983 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP2A1O14983 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms