Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV18A0A075B6X5 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 HTR5BP-201ENST00000430851 1154 ntBASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 MKNK2P1-201ENST00000437526 628 ntBASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 SLC25A1P1-201ENST00000528351 927 ntBASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 AC105339.1-204ENST00000636249 355 ntBASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRAV18A0A075B6X5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 KRT8P14-201ENST00000414254 1442 ntBASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AC073548.1-201ENST00000624088 1882 ntBASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AL080243.2-201ENST00000418783 582 ntBASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 HLA-K-203ENST00000430151 1046 ntBASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 SPDYE14P-201ENST00000442619 822 ntBASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms