Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 AC093214.1-201ENST00000511688 1107 ntBASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 BRI3BPP1-201ENST00000594224 787 ntBASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 AL662799.1-202ENST00000614205 422 ntBASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 AC106028.4-201ENST00000614509 607 ntBASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 AL359881.3-201ENST00000602640 1721 ntBASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ATAD3AQ9NVI7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 AC005562.1-201ENST00000583030 3219 ntBASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 AL928921.2-201ENST00000641325 2442 ntBASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 INTS4P2-202ENST00000614726 2019 ntBASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 TPT1P11-201ENST00000458482 498 ntBASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 AC055876.2-201ENST00000531834 546 ntBASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 AC099568.2-201ENST00000609194 695 ntBASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 AL603764.1-201ENST00000636452 321 ntBASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 PRSS30P-206ENST00000641773 873 ntBASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATAD3AQ9NVI7 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
ATAD3AQ9NVI7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATAD3AQ9NVI7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.33□□□□□ -0.11
ATAD3AQ9NVI7 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.33□□□□□ -0.11
ATAD3AQ9NVI7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms