Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 PTENP1-202ENST00000532280 3996 ntBASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 RPL13AP25-201ENST00000484130 612 ntBASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 AC140912.1-201ENST00000577171 1054 ntBASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 AC138761.1-201ENST00000584393 385 ntBASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LIN7CQ9NUP9 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms