Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN18Q99952 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN18Q99952 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PTPN18Q99952 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPN18Q99952 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PTPN18Q99952 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PTPN18Q99952 WASH3P-207ENST00000560956 1394 ntBASIC16.64■□□□□ 0.26
PTPN18Q99952 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPN18Q99952 KHSRPP1-201ENST00000427983 1768 ntBASIC16.64■□□□□ 0.25
PTPN18Q99952 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPN18Q99952 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN18Q99952 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN18Q99952 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN18Q99952 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN18Q99952 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PTPN18Q99952 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN18Q99952 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN18Q99952 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN18Q99952 AC098934.1-203ENST00000442868 1262 ntBASIC16.64■□□□□ 0.25
PTPN18Q99952 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.64■□□□□ 0.25
PTPN18Q99952 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.64■□□□□ 0.25
PTPN18Q99952 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.64■□□□□ 0.25
PTPN18Q99952 IGHV1-12-201ENST00000518307 205 ntBASIC16.64■□□□□ 0.25
PTPN18Q99952 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN18Q99952 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN18Q99952 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN18Q99952 MIR5001-201ENST00000580185 100 ntBASIC16.64■□□□□ 0.25
PTPN18Q99952 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN18Q99952 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
PTPN18Q99952 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN18Q99952 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
PTPN18Q99952 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN18Q99952 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 LINC00528-201ENST00000600723 2160 ntBASIC16.64■□□□□ 0.25
PTPN18Q99952 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
PTPN18Q99952 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN18Q99952 AC067931.2-201ENST00000623655 2003 ntBASIC16.63■□□□□ 0.25
PTPN18Q99952 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN18Q99952 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN18Q99952 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN18Q99952 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTPN18Q99952 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PTPN18Q99952 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN18Q99952 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PTPN18Q99952 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTPN18Q99952 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PTPN18Q99952 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 OR51A9P-201ENST00000422578 911 ntBASIC16.63■□□□□ 0.25
PTPN18Q99952 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN18Q99952 HLA-DPA2-205ENST00000433582 733 ntBASIC16.63■□□□□ 0.25
PTPN18Q99952 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN18Q99952 AC083801.1-201ENST00000491689 358 ntBASIC16.63■□□□□ 0.25
PTPN18Q99952 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
PTPN18Q99952 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN18Q99952 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN18Q99952 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN18Q99952 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 AC090386.2-201ENST00000623010 1039 ntBASIC16.63■□□□□ 0.25
PTPN18Q99952 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 AC126365.1-201ENST00000578585 1514 ntBASIC16.63■□□□□ 0.25
PTPN18Q99952 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN18Q99952 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN18Q99952 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN18Q99952 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.63■□□□□ 0.25
PTPN18Q99952 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN18Q99952 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms