Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.07■□□□□ 0.32
ARID3AQ99856 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC17.07■□□□□ 0.32
ARID3AQ99856 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ARID3AQ99856 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ARID3AQ99856 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC17.06■□□□□ 0.32
ARID3AQ99856 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC17.06■□□□□ 0.32
ARID3AQ99856 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
ARID3AQ99856 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ARID3AQ99856 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 AC067863.1-201ENST00000494933 530 ntBASIC17.06■□□□□ 0.32
ARID3AQ99856 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
ARID3AQ99856 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.06■□□□□ 0.32
ARID3AQ99856 AC097493.3-201ENST00000509725 367 ntBASIC17.06■□□□□ 0.32
ARID3AQ99856 AL512361.1-201ENST00000554200 418 ntBASIC17.06■□□□□ 0.32
ARID3AQ99856 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.06■□□□□ 0.32
ARID3AQ99856 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 AL390955.2-201ENST00000603032 514 ntBASIC17.06■□□□□ 0.32
ARID3AQ99856 AC097359.3-201ENST00000603982 1210 ntBASIC17.06■□□□□ 0.32
ARID3AQ99856 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ARID3AQ99856 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ARID3AQ99856 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.06■□□□□ 0.32
ARID3AQ99856 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ARID3AQ99856 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ARID3AQ99856 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARID3AQ99856 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.05■□□□□ 0.32
ARID3AQ99856 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 AC105250.1-201ENST00000509378 2057 ntBASIC17.05■□□□□ 0.32
ARID3AQ99856 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.05■□□□□ 0.32
ARID3AQ99856 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.05■□□□□ 0.32
ARID3AQ99856 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ARID3AQ99856 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ARID3AQ99856 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ARID3AQ99856 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.05■□□□□ 0.32
ARID3AQ99856 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.05■□□□□ 0.32
ARID3AQ99856 AC027369.6-201ENST00000525520 931 ntBASIC17.05■□□□□ 0.32
ARID3AQ99856 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.05■□□□□ 0.32
ARID3AQ99856 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.05■□□□□ 0.32
ARID3AQ99856 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
ARID3AQ99856 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.05■□□□□ 0.32
ARID3AQ99856 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.05■□□□□ 0.32
ARID3AQ99856 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC17.05■□□□□ 0.32
ARID3AQ99856 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ARID3AQ99856 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ARID3AQ99856 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ARID3AQ99856 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
ARID3AQ99856 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms