Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ABCA3Q99758 AC015909.5-201ENST00000624336 2266 ntBASIC18.96■□□□□ 0.63
ABCA3Q99758 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
ABCA3Q99758 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCA3Q99758 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ABCA3Q99758 AC103563.1-201ENST00000429316 123 ntBASIC18.95■□□□□ 0.62
ABCA3Q99758 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCA3Q99758 AC025594.1-201ENST00000469533 543 ntBASIC18.95■□□□□ 0.62
ABCA3Q99758 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC18.95■□□□□ 0.62
ABCA3Q99758 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ABCA3Q99758 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC18.95■□□□□ 0.62
ABCA3Q99758 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC18.95■□□□□ 0.62
ABCA3Q99758 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC18.95■□□□□ 0.62
ABCA3Q99758 AC073869.4-201ENST00000620841 800 ntBASIC18.95■□□□□ 0.62
ABCA3Q99758 AC245369.7-201ENST00000631386 350 ntBASIC18.95■□□□□ 0.62
ABCA3Q99758 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ABCA3Q99758 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ABCA3Q99758 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ABCA3Q99758 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCA3Q99758 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ABCA3Q99758 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.95■□□□□ 0.62
ABCA3Q99758 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
ABCA3Q99758 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ABCA3Q99758 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCA3Q99758 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCA3Q99758 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCA3Q99758 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCA3Q99758 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCA3Q99758 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC18.94■□□□□ 0.62
ABCA3Q99758 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ABCA3Q99758 AC011270.2-201ENST00000624293 2550 ntBASIC18.94■□□□□ 0.62
ABCA3Q99758 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
ABCA3Q99758 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ABCA3Q99758 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 PRAL-201ENST00000624952 3286 ntBASIC18.94■□□□□ 0.62
ABCA3Q99758 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ABCA3Q99758 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCA3Q99758 CDK4P1-201ENST00000454213 828 ntBASIC18.94■□□□□ 0.62
ABCA3Q99758 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC18.94■□□□□ 0.62
ABCA3Q99758 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ABCA3Q99758 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCA3Q99758 AL049840.2-201ENST00000602722 535 ntBASIC18.94■□□□□ 0.62
ABCA3Q99758 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
ABCA3Q99758 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.94■□□□□ 0.62
ABCA3Q99758 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.93■□□□□ 0.62
ABCA3Q99758 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ABCA3Q99758 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCA3Q99758 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCA3Q99758 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 ACTBP14-201ENST00000411655 1089 ntBASIC18.93■□□□□ 0.62
ABCA3Q99758 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ABCA3Q99758 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCA3Q99758 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC18.93■□□□□ 0.62
ABCA3Q99758 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCA3Q99758 MT3-202ENST00000561640 514 ntTSL 3 BASIC18.93■□□□□ 0.62
ABCA3Q99758 FAM187B2P-201ENST00000577135 713 ntBASIC18.93■□□□□ 0.62
ABCA3Q99758 MIR4254-201ENST00000581063 76 ntBASIC18.93■□□□□ 0.62
ABCA3Q99758 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCA3Q99758 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 RNF165-205ENST00000588679 2904 ntBASIC18.93■□□□□ 0.62
ABCA3Q99758 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms