Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 AL928921.2-201ENST00000641325 2442 ntBASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.46□□□□□ -0.1
PDLIM5Q96HC4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.46□□□□□ -0.1
PDLIM5Q96HC4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDLIM5Q96HC4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.46□□□□□ -0.1
PDLIM5Q96HC4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.46□□□□□ -0.1
PDLIM5Q96HC4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PDLIM5Q96HC4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PDLIM5Q96HC4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.46□□□□□ -0.1
PDLIM5Q96HC4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 OR2I1P-210ENST00000642037 4691 ntBASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 AL590640.2-201ENST00000457038 527 ntBASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 CR383656.12-201ENST00000549567 513 ntBASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 AC244669.2-201ENST00000612320 853 ntBASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 AC009093.10-201ENST00000641956 1442 ntBASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.45□□□□□ -0.1
PDLIM5Q96HC4 AC011498.7-201ENST00000624986 2027 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 KRT43P-201ENST00000434019 910 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 COX5BP1-201ENST00000507622 393 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AP000812.2-201ENST00000538934 718 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 C2orf69P2-201ENST00000562032 1123 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AC073413.1-201ENST00000603927 732 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AC138951.2-201ENST00000623455 1161 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms