Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 OR2I1P-209ENST00000641730 5365 ntBASIC17.69■□□□□ 0.42
DDX11Q96FC9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX11Q96FC9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX11Q96FC9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 AC099548.2-209ENST00000480264 625 ntBASIC17.68■□□□□ 0.42
DDX11Q96FC9 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 AC243960.2-201ENST00000600996 747 ntBASIC17.68■□□□□ 0.42
DDX11Q96FC9 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
DDX11Q96FC9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX11Q96FC9 AC097376.2-205ENST00000610159 5334 ntBASIC17.68■□□□□ 0.42
DDX11Q96FC9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 AL606495.2-201ENST00000605867 535 ntBASIC17.67■□□□□ 0.42
DDX11Q96FC9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 AHCYP2-201ENST00000430630 1300 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms