Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFT1Q96AA3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RFT1Q96AA3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 NUTM2HP-201ENST00000442076 2498 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 KRT8P24-201ENST00000560290 1559 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 AC007787.1-201ENST00000588095 1583 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 AC012508.2-201ENST00000567613 1472 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 REXO1L4P-201ENST00000605109 1937 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 RN7SL618P-201ENST00000477850 296 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 TMEM198B-204ENST00000484016 896 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 TEX28P1-201ENST00000613479 1221 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 AL138828.2-201ENST00000615812 383 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 TEX28P2-201ENST00000617764 1221 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 Z92544.3-201ENST00000624747 417 ntBASIC13.24□□□□□ -0.29
RFT1Q96AA3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFT1Q96AA3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.24□□□□□ -0.29
RFT1Q96AA3 AL121723.1-201ENST00000445194 1519 ntBASIC13.23□□□□□ -0.29
RFT1Q96AA3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 AL133267.1-201ENST00000398220 340 ntBASIC13.23□□□□□ -0.29
RFT1Q96AA3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms