Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 AC068418.2-201ENST00000577309 3703 ntBASIC13.03□□□□□ -0.32
TMEM54Q969K7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 HIST2H2BB-201ENST00000449108 381 ntBASIC13.03□□□□□ -0.32
TMEM54Q969K7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 SORD2P-201ENST00000558556 1069 ntBASIC13.03□□□□□ -0.32
TMEM54Q969K7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 AL136301.1-201ENST00000615830 422 ntBASIC13.03□□□□□ -0.32
TMEM54Q969K7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 AC009093.10-201ENST00000641956 1442 ntBASIC13.03□□□□□ -0.32
TMEM54Q969K7 AC152010.1-201ENST00000415779 2006 ntBASIC13.03□□□□□ -0.32
TMEM54Q969K7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM54Q969K7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.02□□□□□ -0.32
TMEM54Q969K7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM54Q969K7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM54Q969K7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TMEM54Q969K7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
TMEM54Q969K7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM54Q969K7 SHC1P1-201ENST00000425230 1745 ntBASIC13.02□□□□□ -0.32
TMEM54Q969K7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TMEM54Q969K7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM54Q969K7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM54Q969K7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM54Q969K7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.02□□□□□ -0.32
TMEM54Q969K7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
TMEM54Q969K7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.02□□□□□ -0.32
TMEM54Q969K7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 HILS1-202ENST00000545329 423 ntBASIC13.02□□□□□ -0.33
TMEM54Q969K7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.02□□□□□ -0.33
TMEM54Q969K7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM54Q969K7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM54Q969K7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM54Q969K7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms