Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 WFDC5-201ENST00000307971 1034 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 OR7E122P-201ENST00000383606 1017 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC233724.7-201ENST00000511476 253 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 B3GALT5-AS1-201ENST00000329618 1357 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC090376.1-202ENST00000587276 470 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 CTBP2P7-201ENST00000593270 1244 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 PRKN-210ENST00000612540 603 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 HP-203ENST00000357763 1482 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ANXA3-209ENST00000512884 1335 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AP002353.1-201ENST00000528257 1599 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ACOT9-207ENST00000492081 683 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ATP5G1-209ENST00000514808 359 ntTSL 2 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC104759.1-201ENST00000559109 939 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 SNORD3B-1-201ENST00000577988 758 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AP001120.3-201ENST00000585729 489 ntBASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 AC020917.2-201ENST00000587343 401 ntTSL 3 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SYNE2Q8WXH0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 BAK1P2-201ENST00000532665 631 ntBASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 AC091132.3-201ENST00000579701 470 ntBASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 AC138645.1-201ENST00000582765 470 ntBASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 TUBB8P12-201ENST00000308911 1335 ntBASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 TUBB7P-202ENST00000428444 1305 ntBASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 AC005077.3-201ENST00000449614 213 ntBASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 SSPN-207ENST00000540266 587 ntTSL 4 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 C12orf73-205ENST00000547945 463 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 TMED1-204ENST00000588289 541 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC5.73□□□□□ -1.49
SYNE2Q8WXH0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms