Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 KLF2P2-201ENST00000416807 1039 ntBASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AC092183.1-201ENST00000469884 875 ntBASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 CYMP-203ENST00000474680 1263 ntBASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AC022616.1-201ENST00000518688 554 ntBASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 DUX4L47-201ENST00000566374 394 ntBASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AC093726.1-201ENST00000608064 963 ntBASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 SOCS2P1-201ENST00000417727 557 ntBASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 EIF3FP3-201ENST00000434851 1086 ntBASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 SPTLC1P1-201ENST00000447199 261 ntBASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AC092552.1-201ENST00000547243 906 ntBASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AL132655.2-201ENST00000596276 594 ntBASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 AC079781.5-202ENST00000641784 3743 ntBASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 LRRC59-203ENST00000576448 1531 ntBASIC14.31□□□□□ -0.12
CLHC1Q8NHS4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLHC1Q8NHS4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms