Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 MIR766-201ENST00000390223 111 ntBASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 CHCHD2P6-201ENST00000454346 447 ntBASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 AC005011.1-201ENST00000455206 210 ntBASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 RN7SL47P-201ENST00000488710 299 ntBASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 HNRNPA1P7-201ENST00000521273 963 ntBASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC19.62■□□□□ 0.73
LTBP4Q8N2S1 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 DLX4-206ENST00000611342 1662 ntBASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 TUBB8P9-201ENST00000422534 1276 ntBASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 TUBB8P10-201ENST00000430210 1279 ntBASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 AC015818.3-201ENST00000583797 589 ntBASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 AL121992.3-201ENST00000606186 346 ntBASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 Z98885.3-201ENST00000624882 1757 ntBASIC19.61■□□□□ 0.73
LTBP4Q8N2S1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 CCT8L1P-201ENST00000465400 1674 ntBASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 AL031577.1-201ENST00000339867 399 ntBASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 RN7SL479P-201ENST00000472003 300 ntBASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 PHBP18-201ENST00000546648 813 ntBASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 AC009812.1-201ENST00000605948 1059 ntBASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 NEFHP1-201ENST00000412845 2629 ntBASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 NME1-209ENST00000511355 1645 ntTSL 5 BASIC19.6■□□□□ 0.73
LTBP4Q8N2S1 AC105250.1-201ENST00000509378 2057 ntBASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 AC105424.1-201ENST00000514583 209 ntBASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 AP003170.2-201ENST00000544730 786 ntBASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 AL158032.2-201ENST00000616818 195 ntBASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LTBP4Q8N2S1 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 ACTG1P23-201ENST00000437653 1074 ntBASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 Z84721.1-201ENST00000438841 372 ntBASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC19.58■□□□□ 0.73
LTBP4Q8N2S1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms