Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 HSPA7-201ENST00000445535 1927 ntBASIC15.49■□□□□ 0.07
RFX6Q8HWS3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX6Q8HWS3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 MSTO2P-201ENST00000314835 1709 ntBASIC15.48■□□□□ 0.07
RFX6Q8HWS3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 TLE1P1-201ENST00000422965 589 ntBASIC15.48■□□□□ 0.07
RFX6Q8HWS3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 AC138761.1-201ENST00000584393 385 ntBASIC15.48■□□□□ 0.07
RFX6Q8HWS3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 AC152010.1-201ENST00000415779 2006 ntBASIC15.48■□□□□ 0.07
RFX6Q8HWS3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX6Q8HWS3 AC092135.3-201ENST00000624151 1846 ntBASIC15.47■□□□□ 0.07
RFX6Q8HWS3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFX6Q8HWS3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms