Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 AC140479.7-201ENST00000636301 2332 ntBASIC13.21□□□□□ -0.29
RTTNQ86VV8 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTTNQ86VV8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 SLC25A47P1-201ENST00000531577 414 ntBASIC13.21□□□□□ -0.29
RTTNQ86VV8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 AP001063.1-201ENST00000568332 529 ntBASIC13.21□□□□□ -0.29
RTTNQ86VV8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 CLUHP6-201ENST00000580789 941 ntBASIC13.21□□□□□ -0.29
RTTNQ86VV8 MIR5572-201ENST00000583188 137 ntBASIC13.21□□□□□ -0.29
RTTNQ86VV8 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.21□□□□□ -0.29
RTTNQ86VV8 U62317.3-201ENST00000608319 855 ntBASIC13.21□□□□□ -0.29
RTTNQ86VV8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.21□□□□□ -0.3
RTTNQ86VV8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RTTNQ86VV8 KRT8P14-201ENST00000414254 1442 ntBASIC13.21□□□□□ -0.3
RTTNQ86VV8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.21□□□□□ -0.3
RTTNQ86VV8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
RTTNQ86VV8 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RTTNQ86VV8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.21□□□□□ -0.3
RTTNQ86VV8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.21□□□□□ -0.3
RTTNQ86VV8 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTTNQ86VV8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 C1QBPP1-201ENST00000400117 770 ntBASIC13.2□□□□□ -0.3
RTTNQ86VV8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 PFN1P12-201ENST00000455938 534 ntBASIC13.2□□□□□ -0.3
RTTNQ86VV8 FTH1P14-201ENST00000482930 551 ntBASIC13.2□□□□□ -0.3
RTTNQ86VV8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 MIR5189-201ENST00000577370 114 ntBASIC13.2□□□□□ -0.3
RTTNQ86VV8 MIR4722-201ENST00000578292 60 ntBASIC13.2□□□□□ -0.3
RTTNQ86VV8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 BTNL10-201ENST00000595971 695 ntBASIC13.2□□□□□ -0.3
RTTNQ86VV8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
RTTNQ86VV8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTTNQ86VV8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms