Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC20.33■□□□□ 0.85
CDCA8Q53HL2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 AC078875.1-201ENST00000431907 724 ntBASIC20.33■□□□□ 0.85
CDCA8Q53HL2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 NDUFV2P1-201ENST00000596415 907 ntBASIC20.33■□□□□ 0.85
CDCA8Q53HL2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC20.33■□□□□ 0.85
CDCA8Q53HL2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.33■□□□□ 0.84
CDCA8Q53HL2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDCA8Q53HL2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC20.33■□□□□ 0.84
CDCA8Q53HL2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC20.33■□□□□ 0.84
CDCA8Q53HL2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDCA8Q53HL2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC20.33■□□□□ 0.84
CDCA8Q53HL2 AC063926.3-201ENST00000624734 5658 ntBASIC20.33■□□□□ 0.84
CDCA8Q53HL2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDCA8Q53HL2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 TUBBP5-203ENST00000508529 1334 ntBASIC20.32■□□□□ 0.84
CDCA8Q53HL2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 AC125604.1-201ENST00000496255 707 ntBASIC20.32■□□□□ 0.84
CDCA8Q53HL2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 AC026740.1-201ENST00000607068 791 ntBASIC20.32■□□□□ 0.84
CDCA8Q53HL2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 FLJ16779-201ENST00000612722 7638 ntBASIC20.32■□□□□ 0.84
CDCA8Q53HL2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA8Q53HL2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 AC022447.6-201ENST00000515522 438 ntBASIC20.31■□□□□ 0.84
CDCA8Q53HL2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 AC136759.1-202ENST00000530858 2194 ntBASIC20.31■□□□□ 0.84
CDCA8Q53HL2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA8Q53HL2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms