Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.19□□□□□ -0.46
SPCS3P61009 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.19□□□□□ -0.46
SPCS3P61009 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.19□□□□□ -0.46
SPCS3P61009 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 AC022447.6-201ENST00000515522 438 ntBASIC12.19□□□□□ -0.46
SPCS3P61009 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.19□□□□□ -0.46
SPCS3P61009 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.19□□□□□ -0.46
SPCS3P61009 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 AC051619.7-201ENST00000568314 623 ntBASIC12.19□□□□□ -0.46
SPCS3P61009 MIR3687-2-201ENST00000577708 61 ntBASIC12.19□□□□□ -0.46
SPCS3P61009 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 MIR3687-1-201ENST00000614492 61 ntBASIC12.19□□□□□ -0.46
SPCS3P61009 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.19□□□□□ -0.46
SPCS3P61009 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SPCS3P61009 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.19□□□□□ -0.46
SPCS3P61009 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.19□□□□□ -0.46
SPCS3P61009 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.19□□□□□ -0.46
SPCS3P61009 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.19□□□□□ -0.46
SPCS3P61009 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SPCS3P61009 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
SPCS3P61009 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPCS3P61009 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.18□□□□□ -0.46
SPCS3P61009 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.18□□□□□ -0.46
SPCS3P61009 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.18□□□□□ -0.46
SPCS3P61009 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.18□□□□□ -0.46
SPCS3P61009 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.18□□□□□ -0.46
SPCS3P61009 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 AL512361.1-201ENST00000554200 418 ntBASIC12.18□□□□□ -0.46
SPCS3P61009 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 AC134407.3-201ENST00000624035 2139 ntBASIC12.18□□□□□ -0.46
SPCS3P61009 AC004461.2-201ENST00000629517 803 ntBASIC12.18□□□□□ -0.46
SPCS3P61009 AL109936.8-201ENST00000641772 604 ntBASIC12.18□□□□□ -0.46
SPCS3P61009 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.18□□□□□ -0.46
SPCS3P61009 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SPCS3P61009 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPCS3P61009 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms